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					@ -11,7 +11,6 @@ | 
				
			
			
		
	
		
			
				
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					;; frame size | 
				
			
			
		
	
		
			
				
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					(setq initial-frame-alist '((top . 10)(left . 20) | 
				
			
			
		
	
		
			
				
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								    (width . 90)(height . 50))) | 
				
			
			
		
	
		
			
				
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 | 
				
			
			
		
	
		
			
				
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					;; which-key: | 
				
			
			
		
	
		
			
				
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					(use-package which-key | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
	
		
			
				
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					@ -86,7 +85,9 @@ | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
		
			
				
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					  :init | 
				
			
			
		
	
		
			
				
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					  (progn | 
				
			
			
		
	
		
			
				
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					    (setq dashboard-items '((recents . 5) | 
				
			
			
		
	
		
			
				
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					    (setq recentf-exclude '("/Users/gmarx/beorg/")) | 
				
			
			
		
	
		
			
				
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					    (setq dashboard-items '( | 
				
			
			
		
	
		
			
				
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								    ;;(recents . 5) | 
				
			
			
		
	
		
			
				
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								    (bookmarks . 5) | 
				
			
			
		
	
		
			
				
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								    (projects . 5) | 
				
			
			
		
	
		
			
				
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								    (agenda . 5))) | 
				
			
			
		
	
	
		
			
				
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					@ -127,8 +128,9 @@ | 
				
			
			
		
	
		
			
				
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					    (setq-default TeX-master nil) ; Query for master file. | 
				
			
			
		
	
		
			
				
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					    (setq TeX-auto-save t) ; Enable parse on save. | 
				
			
			
		
	
		
			
				
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					    (setq TeX-save-query nil) | 
				
			
			
		
	
		
			
				
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					    (setq TeX-command-force "LaTex") | 
				
			
			
		
	
		
			
				
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					    (setq latex-run-command "pdflatex") | 
				
			
			
		
	
		
			
				
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					    (custom-set-variables '(LaTeX-command "latex -synctex=1")) | 
				
			
			
		
	
		
			
				
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					    ;;(setq TeX-command-force "LaTex") | 
				
			
			
		
	
		
			
				
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					    ;;(setq latex-run-command "pdflatex") | 
				
			
			
		
	
		
			
				
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					    (setq TeX-parse-self t) ; Enable parse on load. | 
				
			
			
		
	
		
			
				
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					    (setenv "PATH" (concat (getenv "PATH") ":/Library/TeX/texbin/")) | 
				
			
			
		
	
		
			
				
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					    (setq exec-path (append exec-path '("/Library/TeX/texbin/"))) | 
				
			
			
		
	
	
		
			
				
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					@ -188,13 +190,13 @@ | 
				
			
			
		
	
		
			
				
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					  :after org  | 
				
			
			
		
	
		
			
				
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					  :bind ("C-x p" . org-pomodoro)) | 
				
			
			
		
	
		
			
				
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					;; org configuration: | 
				
			
			
		
	
		
			
				
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					(setq org-agenda-files '("~/beorg/phd.org" "~/beorg/students.org" "~/beorg/inbox.org" "~/beorg/academia.org")) | 
				
			
			
		
	
		
			
				
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					(add-hook 'org-mode-hook | 
				
			
			
		
	
		
			
				
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						  (lambda() | 
				
			
			
		
	
		
			
				
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						    ;; dictionary | 
				
			
			
		
	
		
			
				
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						    (org-bullets-mode 1) | 
				
			
			
		
	
		
			
				
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						    (ispell-change-dictionary "en") | 
				
			
			
		
	
		
			
				
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						    (setq org-image-actual-width nil) | 
				
			
			
		
	
		
			
				
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						    (setq org-tags-column 5) | 
				
			
			
		
	
		
			
				
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						    (setq org-format-latex-options (plist-put org-format-latex-options :scale 1.5)) | 
				
			
			
		
	
		
			
				
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						    (setq org-latex-create-formula-image-program 'imagemagick) | 
				
			
			
		
	
		
			
				
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						    (setq org-startup-indented t) ; Enable `org-indent-mode' by default | 
				
			
			
		
	
	
		
			
				
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					@ -279,6 +281,44 @@ | 
				
			
			
		
	
		
			
				
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					  :config | 
				
			
			
		
	
		
			
				
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					  (setq python-shell-interpreter "python3") | 
				
			
			
		
	
		
			
				
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					  (setq venv-location "~/.virtualenvs")) | 
				
			
			
		
	
		
			
				
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					;; org-alert | 
				
			
			
		
	
		
			
				
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					(use-package org-alert | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
		
			
				
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					  :config | 
				
			
			
		
	
		
			
				
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					  (setq alert-default-style 'osx-notifier)) | 
				
			
			
		
	
		
			
				
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					;; reftex | 
				
			
			
		
	
		
			
				
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					(use-package reftex | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
		
			
				
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					  :defer t | 
				
			
			
		
	
		
			
				
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				 | 
				
					  :config | 
				
			
			
		
	
		
			
				
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					  (setq reftex-cite-prompt-optional-args t)); Prompt for empty optional arguments in cite | 
				
			
			
		
	
		
			
				
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					;; org-exporter: | 
				
			
			
		
	
		
			
				
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					(use-package ox-twbs | 
				
			
			
		
	
		
			
				
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					  :ensure t) | 
				
			
			
		
	
		
			
				
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				 | 
				
					;;multiple coursors: | 
				
			
			
		
	
		
			
				
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					(use-package ace-mc | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
		
			
				
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				 | 
				
					  :config | 
				
			
			
		
	
		
			
				
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					  (global-set-key (kbd "C-)") 'ace-mc-add-multiple-cursors) | 
				
			
			
		
	
		
			
				
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					  (global-set-key (kbd "C-M-)") 'ace-mc-add-single-cursor)) | 
				
			
			
		
	
		
			
				
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					;;ace-jump: | 
				
			
			
		
	
		
			
				
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					(use-package ace-jump-mode | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
		
			
				
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					  :bind ("C-x j" . ace-jump-mode)) | 
				
			
			
		
	
		
			
				
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					;; pyenv: | 
				
			
			
		
	
		
			
				
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					(use-package pyvenv | 
				
			
			
		
	
		
			
				
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					  :ensure t | 
				
			
			
		
	
		
			
				
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					 | 
				
				 | 
				
					  :config | 
				
			
			
		
	
		
			
				
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				 | 
				
					  (pyvenv-mode 1)) | 
				
			
			
		
	
		
			
				
					 | 
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				 | 
				
					;;ess: | 
				
			
			
		
	
		
			
				
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					;(use-package ess | 
				
			
			
		
	
		
			
				
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				 | 
				
					;  :ensure t) | 
				
			
			
		
	
		
			
				
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				 | 
				
					;(require 'ess-site) | 
				
			
			
		
	
		
			
				
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 | 
				
			
			
		
	
		
			
				
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 | 
				
			
			
		
	
		
			
				
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 | 
				
			
			
		
	
		
			
				
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					;;-=-=-=-=-=-=- | 
				
			
			
		
	
		
			
				
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				 | 
				
					;; mu4e | 
				
			
			
		
	
		
			
				
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				 | 
				
					(use-package mu4e | 
				
			
			
		
	
		
			
				
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				 | 
				
					  :commands (mu4e) | 
				
			
			
		
	
	
		
			
				
					| 
						
							
								
							
						
						
							
								
							
						
						
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					@ -402,22 +442,33 @@ | 
				
			
			
		
	
		
			
				
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					  ;;(define-key mu4e-headers-mode-map "s" 'helm-mu) | 
				
			
			
		
	
		
			
				
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				 | 
				
					  ;;(define-key mu4e-view-mode-map "s" 'helm-mu) | 
				
			
			
		
	
		
			
				
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				 | 
				
					  ) | 
				
			
			
		
	
		
			
				
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 | 
				
			
			
		
	
		
			
				
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				 | 
				
					;;agenda files | 
				
			
			
		
	
		
			
				
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					;;(setq org-agenda-files '("~/beorg/phd.org" "~/beorg/students.org" "~/beorg/inbox.org" "~/beorg/academia.org")) | 
				
			
			
		
	
		
			
				
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					 | 
				
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					(setq recentf-exclude (org-agenda-files)) | 
				
			
			
		
	
		
			
				
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				 | 
				
					   | 
				
			
			
		
	
		
			
				
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				 | 
				
					(custom-set-variables | 
				
			
			
		
	
		
			
				
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				 | 
				
					 ;; custom-set-variables was added by Custom. | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 ;; If you edit it by hand, you could mess it up, so be careful. | 
				
			
			
		
	
		
			
				
					 | 
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				 | 
				
					 ;; Your init file should contain only one such instance. | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 ;; If there is more than one, they won't work right. | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 '(LaTeX-command "latex -synctex=1") | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 '(custom-safe-themes | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					   (quote | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    ("99ea831ca79a916f1bd789de366b639d09811501e8c092c85b2cb7d697777f93" "bf387180109d222aee6bb089db48ed38403a1e330c9ec69fe1f52460a8936b66" default))) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    ("2f1518e906a8b60fac943d02ad415f1d8b3933a5a7f75e307e6e9a26ef5bf570" "71e5acf6053215f553036482f3340a5445aee364fb2e292c70d9175fb0cc8af7" "99ea831ca79a916f1bd789de366b639d09811501e8c092c85b2cb7d697777f93" "bf387180109d222aee6bb089db48ed38403a1e330c9ec69fe1f52460a8936b66" default))) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 '(org-agenda-files | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					   (quote | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    ("~/beorg/inbox.org" "~/beorg/academia.org" "~/beorg/water-quality.org" "~/beorg/phd.org" "~/lwc/projects/dynamicSystems/dynamic-systems.org"))) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 '(package-selected-packages | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					   (quote | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    (latex-preview-pane org-pomodoro which-key virtualenvwrapper use-package treemacs-projectile pdf-tools org-bullets mu4e-maildirs-extension mu4e-alert magit helm-projectile helm-mu flycheck expand-region doom-themes doom-modeline dashboard company auctex))) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    (pyvenv ess ace-mc ox-twbs org-alert latex-preview-pane org-pomodoro which-key virtualenvwrapper use-package treemacs-projectile pdf-tools org-bullets mu4e-maildirs-extension mu4e-alert magit helm-projectile helm-mu flycheck expand-region doom-themes doom-modeline dashboard company auctex))) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 '(pdf-tools-handle-upgrades nil) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					 '(safe-local-variable-values | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					   (quote | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    ((LaTeX-includegraphics-read-file . LaTeX-includegraphics-read-file-relative) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					    ((fill-column . 5000:) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					     (ispell-local-dictionary . castellano) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					     (ispell-local-directory . castellano) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					     (LaTeX-includegraphics-read-file . LaTeX-includegraphics-read-file-relative) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					     (set-fill-column . 5000) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					     (set-fill-column . 2000) | 
				
			
			
		
	
		
			
				
					 | 
					 | 
				
				 | 
				
					     (TeX-auto-save . t) | 
				
			
			
		
	
	
		
			
				
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