commenting mu4e, ace-jump and ace-window; needs clean vars**

.emacs

@@ -2,7 +2,8 @@
 ;;--------
 ;; Melpa repository:
 (require 'package)
-(add-to-list 'package-archives '("melpa" . "https://melpa.org/packages/") t)
+(add-to-list 'package-archives
+	     '("melpa" . "https://melpa.org/packages/")t)
 (package-initialize)
 ;; use-package
 (unless (package-installed-p 'use-package)
@@ -310,143 +311,42 @@
   :ensure t
   :config
   (pyvenv-mode 1))
-;;ess:
-;(use-package ess
-;  :ensure t)
-;(require 'ess-site)
-
-
+;; org-configuration:
+(org-babel-do-load-languages
+ 'org-babel-load-languages
+ '((python . t)))
 
-
-;;-=-=-=-=-=-=-
-;; mu4e
-(use-package mu4e
-  :commands (mu4e)
-  :init
-  ;;(progn (require 'helm-mu))
-  :config
-  (add-to-list 'load-path "/usr/local/share/emacs/site-lisp/mu/mu4e")
-  (setq mu4e-mu-binary "/usr/local/bin/mu"))
-;;-+-+-+-+-+-+-+-+-+-+-+-+
-;; "default" parameters from Gmail
-(setq user-full-name  "Gerardo Marx Chávez-Campos") ;;user
-(setq mu4e-compose-signature t) ;; signature in file ~/.signature
-(add-hook 'mu4e-compose-mode-hook 'flyspell-mode(setq ispell-local-dictionary "castellano")) ;; spell check
-;; attempt to show images when viewing messages
-(setq mu4e-view-show-images t)
-(setq mu4e-sent-folder "/Gmail/sent"
-      ;; mu4e-sent-messages-behavior 'delete ;; Unsure how this should be configured
-      mu4e-drafts-folder "/Gmail/drafts"
-      user-mail-address "gmarx_cc@itmorelia.edu.mx"
-      smtpmail-local-domain "gmail.com"
-      smtpmail-default-smtp-server "smtp.gmail.com"
-      smtpmail-stream-type 'starttls
-      smtpmail-smtp-server "smtp.gmail.com"
-      smtpmail-smtp-service 587)
-;;  ---
-;; Now I set a list of 
-(defvar my-mu4e-account-alist
-  '(("Gmail"
-     (mu4e-sent-folder "/Gmail/sent")
-     (mu4e-drafts-folder "/Gmail/drafts")
-     (user-mail-address "gmarx_cc@itmorelia.edu.mx")
-     (smtpmail-smtp-user "gmarx_cc@itmorelia.edu.mx")
-     (smtpmail-local-domain "gmail.com")
-     (smtpmail-default-smtp-server "smtp.gmail.com")
-     (smtpmail-stream-type starttls)
-     (smtpmail-smtp-server "smtp.gmail.com")
-     (smtpmail-smtp-service 587)
-     )
-    ;; Include any other accounts here ...
-   ("Exchange"
-    (mu4e-sent-folder "/Exchange/sent")
-    (mu4e-drafts-folder "/Exchange/drafts")
-    (user-mail-address "gerardo.cc@morelia.tecnm.mx")
-    (smtpmail-smtp-user "gerardo.cc@morelia.tecnm.mx")
-    (smtpmail-local-domain "office365.com")
-    (smtpmail-default-smtp-server "smtp.office365.com")
-    (smtpmail-stream-type starttls)
-    (smtpmail-smtp-server "smtp.office365.com")
-    (smtpmail-smtp-service 587)
-     )
-   ;;
-    ;; hotmail
-   ("Hotmail"
-    (mu4e-sent-folder "/Hotmail/sent")
-    (mu4e-drafts-folder "/Hotmail/drafts")
-    (user-mail-address "gmarx_cc@hotmail.com")
-    (smtpmail-smtp-user "gmarx_cc@hotmail.com")
-    (smtpmail-local-domain "office365.com")
-    (smtpmail-default-smtp-server "smtp.office365.com")
-    (smtpmail-stream-type starttls)
-    (smtpmail-smtp-server "smtp.office365.com")
-    (smtpmail-smtp-service 25)
-     )
-     ))
-;;  ---
-(defun my-mu4e-set-account ()
-  "Set the account for composing a message.
-   This function is taken from: 
-     https://www.djcbsoftware.nl/code/mu/mu4e/Multiple-accounts.html"
-  (let* ((account
-    (if mu4e-compose-parent-message
-        (let ((maildir (mu4e-message-field mu4e-compose-parent-message :maildir)))
-    (string-match "/\\(.*?\\)/" maildir)
-    (match-string 1 maildir))
-      (completing-read (format "Compose with account: (%s) "
-             (mapconcat #'(lambda (var) (car var))
-            my-mu4e-account-alist "/"))
-           (mapcar #'(lambda (var) (car var)) my-mu4e-account-alist)
-           nil t nil nil (caar my-mu4e-account-alist))))
-   (account-vars (cdr (assoc account my-mu4e-account-alist))))
-    (if account-vars
-  (mapc #'(lambda (var)
-      (set (car var) (cadr var)))
-        account-vars)
-      (error "No email account found"))))
-(add-hook 'mu4e-compose-pre-hook 'my-mu4e-set-account)
-;;-+-+-+-+-+-+-+-+-+-+-+-+
-;;---------
-;; mu4e-maildirs-extension
-(use-package mu4e-maildirs-extension
+;;ess:
+(use-package ess
   :ensure t
-  :init
-  (mu4e-maildirs-extension)
-  :custom
-  (mu4e-maildirs-extension-custom-list '("/Gmail/INBOX" "/Exchange/INBOX" "/Hotmail/INBOX"))
-  )
+  :init (require 'ess-site))
 
-;; mu4e-alert
-(use-package mu4e-alert
+;; markdown:
+(use-package markdown-mode
   :ensure t
-  :after mu4e
+  :commands (markdown-mode gfm-mode)
+  :mode (("README\\.md\\'" . gfm-mode)
+         ("\\.md\\'" . markdown-mode)
+         ("\\.markdown\\'" . markdown-mode))
   :init
-  (setq mu4e-alert-interesting-mail-query
-    (concat
-     "flag:unread maildir:/Exchange/INBOX "
-     "OR "
-     "flag:unread maildir:/Gmail/INBOX"
-     ))
-  (mu4e-alert-enable-mode-line-display)
-  (defun gjstein-refresh-mu4e-alert-mode-line ()
-    (interactive)
-    (mu4e~proc-kill)
-    (mu4e-alert-enable-mode-line-display)
-    )
-  (run-with-timer 0 60 'gjstein-refresh-mu4e-alert-mode-line))
-;; helm
-(use-package helm-mu
-  :ensure t
-  :config
-  ;;(define-key mu4e-main-mode-map "s" 'helm-mu)
-  ;;(define-key mu4e-headers-mode-map "s" 'helm-mu)
-  ;;(define-key mu4e-view-mode-map "s" 'helm-mu)
+  (setq markdown-command "multimarkdown")
+  (add-hook 'markdown-mode-hook
+	    (lambda()
+	      (ispell-change-dictionary "en")
+	      (flyspell-mode 1)))
+  (setq markdown-css-paths '(
+			     "./assets/stylesheets/style.css"
+			     "./assets/stylesheets/pilcrow.css"
+			     "./assets/stylesheets/hljs-github.min.css"
+			     ))
   )
 
-;;agenda files
-;;(setq org-agenda-files '("~/beorg/phd.org" "~/beorg/students.org" "~/beorg/inbox.org" "~/beorg/academia.org"))
-(setq recentf-exclude (org-agenda-files))
-  
+;;criticMarkup
+(use-package cm-mode
+  :ensure t)
+
+;;org-trello
+(require 'org-trello)
 (custom-set-variables
  ;; custom-set-variables was added by Custom.
  ;; If you edit it by hand, you could mess it up, so be careful.
@@ -455,17 +355,23 @@
  '(LaTeX-command "latex -synctex=1")
  '(custom-safe-themes
    (quote
-    ("2f1518e906a8b60fac943d02ad415f1d8b3933a5a7f75e307e6e9a26ef5bf570" "71e5acf6053215f553036482f3340a5445aee364fb2e292c70d9175fb0cc8af7" "99ea831ca79a916f1bd789de366b639d09811501e8c092c85b2cb7d697777f93" "bf387180109d222aee6bb089db48ed38403a1e330c9ec69fe1f52460a8936b66" default)))
+    ("7a994c16aa550678846e82edc8c9d6a7d39cc6564baaaacc305a3fdc0bd8725f" "5b809c3eae60da2af8a8cfba4e9e04b4d608cb49584cb5998f6e4a1c87c057c4" "d74c5485d42ca4b7f3092e50db687600d0e16006d8fa335c69cf4f379dbd0eee" "2f1518e906a8b60fac943d02ad415f1d8b3933a5a7f75e307e6e9a26ef5bf570" "71e5acf6053215f553036482f3340a5445aee364fb2e292c70d9175fb0cc8af7" "99ea831ca79a916f1bd789de366b639d09811501e8c092c85b2cb7d697777f93" "bf387180109d222aee6bb089db48ed38403a1e330c9ec69fe1f52460a8936b66" default)))
+ '(markdown-command "/usr/local/bin/pandoc" t)
  '(org-agenda-files
    (quote
-    ("~/beorg/inbox.org" "~/beorg/academia.org" "~/beorg/water-quality.org" "~/beorg/phd.org" "~/lwc/projects/dynamicSystems/dynamic-systems.org")))
+    ("~/lwc/projects/dynamicSystems/trello-jason.org" "~/beorg/inbox.org" "~/beorg/academia.org" "~/beorg/water-quality.org" "~/beorg/phd.org" "~/lwc/projects/dynamicSystems/dynamic-systems.org")))
+ '(org-trello-current-prefix-keybinding "C-c o" nil (org-trello))
+ '(org-trello-files (quote ("~/beorg/trello-org.org")) nil (org-trello))
  '(package-selected-packages
    (quote
-    (pyvenv ess ace-mc ox-twbs org-alert latex-preview-pane org-pomodoro which-key virtualenvwrapper use-package treemacs-projectile pdf-tools org-bullets mu4e-maildirs-extension mu4e-alert magit helm-projectile helm-mu flycheck expand-region doom-themes doom-modeline dashboard company auctex)))
+    (ace-jump cm-mode org-trello markdown-mode pyvenv ess ace-mc ox-twbs org-alert latex-preview-pane org-pomodoro which-key virtualenvwrapper use-package treemacs-projectile pdf-tools org-bullets mu4e-maildirs-extension mu4e-alert magit helm-projectile helm-mu flycheck expand-region doom-themes doom-modeline dashboard company auctex)))
  '(pdf-tools-handle-upgrades nil)
  '(safe-local-variable-values
    (quote
-    ((fill-column . 5000:)
+    ((markdown-css-paths . "./assets/stylesheets/main.css")
+     (markdown-css-path . "./assets/stylesheets/main.css")
+     (column-width . 5000)
+     (fill-column . 5000:)
      (ispell-local-dictionary . castellano)
      (ispell-local-directory . castellano)
      (LaTeX-includegraphics-read-file . LaTeX-includegraphics-read-file-relative)
@@ -478,6 +384,171 @@
      (org-attach-preferred-new-method . ask))))
  '(send-mail-function (quote smtpmail-send-it)))
 
+
+
+;; org-trello:
+(use-package org-trello
+  :ensure t)
+
+;; ace-window
+(use-package ace-window
+  :ensure t
+  :bind
+  ("M-o" . 'ace-window)
+  :config
+  (setq aw-keys '(?a ?s ?d ?f ?g ?h ?j ?k ?l)))
+
+;; ace-jump
+(use-package ace-jump-mode
+  :ensure t
+  :bind
+  ("C-c SPC" . 'ace-jump-mode)
+  ("C-c C-j l" . 'ace-jump-line-mode)
+  ("C-c C-j c" . 'ace-jump-char-mode))
+;;-0-0-0-0-0-0-0
+;; my functions:
+
+;; show in finder
+(defun show-in-finder ()
+  (interactive)
+  (shell-command (concat "open -R " buffer-file-name)))
+
+(global-set-key (kbd "C-x x f") 'show-in-finder)
+;;
+
+;;-=-=-=-=-=-=-
+;; mu4e
+;; (use-package mu4e
+;;   :commands (mu4e)
+;;   :init
+;;   ;;(progn (require 'helm-mu))
+;;   :config
+;;   (add-to-list 'load-path "/usr/local/share/emacs/site-lisp/mu/mu4e")
+;;   (setq mu4e-mu-binary "/usr/local/bin/mu"))
+;; ;;-+-+-+-+-+-+-+-+-+-+-+-+
+;; ;; "default" parameters from Gmail
+;; (setq user-full-name  "Gerardo Marx Chávez-Campos") ;;user
+;; (setq mu4e-compose-signature t) ;; signature in file ~/.signature
+;; (add-hook 'mu4e-compose-mode-hook 'flyspell-mode(setq ispell-local-dictionary "castellano")) ;; spell check
+;; ;; attempt to show images when viewing messages
+;; (setq mu4e-view-show-images t)
+;; (setq mu4e-sent-folder "/Gmail/sent"
+;;       ;; mu4e-sent-messages-behavior 'delete ;; Unsure how this should be configured
+;;       mu4e-drafts-folder "/Gmail/drafts"
+;;       user-mail-address "gmarx_cc@itmorelia.edu.mx"
+;;       smtpmail-local-domain "gmail.com"
+;;       smtpmail-default-smtp-server "smtp.gmail.com"
+;;       smtpmail-stream-type 'starttls
+;;       smtpmail-smtp-server "smtp.gmail.com"
+;;       smtpmail-smtp-service 587)
+;; ;;  ---
+;; ;; Now I set a list of 
+;; (defvar my-mu4e-account-alist
+;;   '(("Gmail"
+;;      (mu4e-sent-folder "/Gmail/sent")
+;;      (mu4e-drafts-folder "/Gmail/drafts")
+;;      (user-mail-address "gmarx_cc@itmorelia.edu.mx")
+;;      (smtpmail-smtp-user "gmarx_cc@itmorelia.edu.mx")
+;;      (smtpmail-local-domain "gmail.com")
+;;      (smtpmail-default-smtp-server "smtp.gmail.com")
+;;      (smtpmail-stream-type starttls)
+;;      (smtpmail-smtp-server "smtp.gmail.com")
+;;      (smtpmail-smtp-service 587)
+;;      )
+;;     ;; Include any other accounts here ...
+;;    ("Exchange"
+;;     (mu4e-sent-folder "/Exchange/sent")
+;;     (mu4e-drafts-folder "/Exchange/drafts")
+;;     (user-mail-address "gerardo.cc@morelia.tecnm.mx")
+;;     (smtpmail-smtp-user "gerardo.cc@morelia.tecnm.mx")
+;;     (smtpmail-local-domain "office365.com")
+;;     (smtpmail-default-smtp-server "smtp.office365.com")
+;;     (smtpmail-stream-type starttls)
+;;     (smtpmail-smtp-server "smtp.office365.com")
+;;     (smtpmail-smtp-service 587)
+;;      )
+;;    ;;
+;;     ;; hotmail
+;;    ("Hotmail"
+;;     (mu4e-sent-folder "/Hotmail/sent")
+;;     (mu4e-drafts-folder "/Hotmail/drafts")
+;;     (user-mail-address "gmarx_cc@hotmail.com")
+;;     (smtpmail-smtp-user "gmarx_cc@hotmail.com")
+;;     (smtpmail-local-domain "office365.com")
+;;     (smtpmail-default-smtp-server "smtp.office365.com")
+;;     (smtpmail-stream-type starttls)
+;;     (smtpmail-smtp-server "smtp.office365.com")
+;;     (smtpmail-smtp-service 25)
+;;      )
+;;      ))
+;; ;;  ---
+;; (defun my-mu4e-set-account ()
+;;   "Set the account for composing a message.
+;;    This function is taken from: 
+;;      https://www.djcbsoftware.nl/code/mu/mu4e/Multiple-accounts.html"
+;;   (let* ((account
+;;     (if mu4e-compose-parent-message
+;;         (let ((maildir (mu4e-message-field mu4e-compose-parent-message :maildir)))
+;;     (string-match "/\\(.*?\\)/" maildir)
+;;     (match-string 1 maildir))
+;;       (completing-read (format "Compose with account: (%s) "
+;;              (mapconcat #'(lambda (var) (car var))
+;;             my-mu4e-account-alist "/"))
+;;            (mapcar #'(lambda (var) (car var)) my-mu4e-account-alist)
+;;            nil t nil nil (caar my-mu4e-account-alist))))
+;;    (account-vars (cdr (assoc account my-mu4e-account-alist))))
+;;     (if account-vars
+;;   (mapc #'(lambda (var)
+;;       (set (car var) (cadr var)))
+;;         account-vars)
+;;       (error "No email account found"))))
+;; (add-hook 'mu4e-compose-pre-hook 'my-mu4e-set-account)
+;; ;;-+-+-+-+-+-+-+-+-+-+-+-+
+;; ;;---------
+;; ;; mu4e-maildirs-extension
+;; (use-package mu4e-maildirs-extension
+;;   :ensure t
+;;   :init
+;;   (mu4e-maildirs-extension)
+;;   :custom
+;;   (mu4e-maildirs-extension-custom-list '("/Gmail/INBOX" "/Exchange/INBOX" "/Hotmail/INBOX"))
+;;   )
+
+;; ;; mu4e-alert
+;; (use-package mu4e-alert
+;;   :ensure t
+;;   :after mu4e
+;;   :init
+;;   (setq mu4e-alert-interesting-mail-query
+;;     (concat
+;;      "flag:unread maildir:/Exchange/INBOX "
+;;      "OR "
+;;      "flag:unread maildir:/Gmail/INBOX"
+;;      ))
+;;   (mu4e-alert-enable-mode-line-display)
+;;   (defun gjstein-refresh-mu4e-alert-mode-line ()
+;;     (interactive)
+;;     (mu4e~proc-kill)
+;;     (mu4e-alert-enable-mode-line-display)
+;;     )
+;;   (run-with-timer 0 60 'gjstein-refresh-mu4e-alert-mode-line))
+;; ;; helm
+;; (use-package helm-mu
+;;   :ensure t
+;;   :config
+;;   ;;(define-key mu4e-main-mode-map "s" 'helm-mu)
+;;   ;;(define-key mu4e-headers-mode-map "s" 'helm-mu)
+;;   ;;(define-key mu4e-view-mode-map "s" 'helm-mu)
+;;   )
+
+
+;;=-=-=-=-=-=-=-=-=-=-=-=
+;;agenda files
+;;(setq org-agenda-files '("~/beorg/phd.org" "~/beorg/students.org" "~/beorg/inbox.org" "~/beorg/academia.org"))
+(setq recentf-exclude (org-agenda-files))
+  
+
+
 (custom-set-faces
  ;; custom-set-faces was added by Custom.
  ;; If you edit it by hand, you could mess it up, so be careful.